Tag: habitat mapping

Noltii leaf - Charles Bagshaw

Accelerate Seagrass – Site Selection

Accelerate Seagrass is a collaborative program being delivered by Climate Impact Partners, Deloitte, Project Seagrass, and the National Oceanography Centre which aims to support groundbreaking research into seagrass carbon sequestration and unlock long-term finance to save and reinstate vital seagrass meadows.   Part of this programme of work involves collaborating with community groups across Scotland to develop knowledge

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Drone controller being used next to kelp bed

Accelerate Seagrass Drone Survey

Accelerate Seagrass is a collaborative program being delivered by Climate Impact Partners, Deloitte, Project Seagrass, and the National Oceanography Centre which aims to support groundbreaking research into seagrass carbon sequestration and unlock long-term finance to save and reinstate vital seagrass meadows.   Part of this programme of work includes mapping to record the presence and extent of

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Noltii leaf - Charles Bagshaw

Accelerate Seagrass – Site Selection

Accelerate Seagrass is a collaborative program being delivered by Climate Impact Partners, Deloitte, Project Seagrass, and the National Oceanography Centre which aims to support groundbreaking research into seagrass carbon sequestration and unlock long-term finance to save and reinstate vital seagrass meadows.   Part of this programme of work involves collaborating with community groups across Scotland to develop knowledge of historic and current seagrass meadows and the threats facing Scottish seagrass today In this blog, our interns Ewan Garvey and Jasper Brown explain the process of site selection at Project Seagrass. Site selection is a process that allows Project Seagrass to identify locations where experimental work or restoration is most likely to succeed. It involves the analysis of existing information, suitability models, and field data. As seagrass meadows are complex ecosystems, these steps are necessary to ascertain the most suitable site for a work package to take place at. 1. Existing Information Often, the first aspect is creating a database of all information surrounding seagrass in the area, including: current and past research, intertidal maps, local knowledge and satellite images. Key information is gathered from: SeagrassSpotter – for recent presence of seagrass as well as species, area cover and sediment type. Historical records – often from local surveys carried out by councils and fisheries. This is used to try quantify the meadow recession or growth. ⁽¹⁾ By collecting this information, we validate the presence of seagrass at sites of interest, and begin to understand potential issues. A screenshot of Seagrass Spotter includes spotter points used in Buent Island survey 2. Habitat Suitability Modelling Habitat suitability modelling is used to compare the characteristics of viable sites. It uses data such as: Temperature, Bathymetry, Salinity, Light availability. The model is created through the use of software like MaxEnt, by inputting many datasets to quantify the likelihood of seagrass presence/ the ability of the environment to sustain seagrass. ⁽²⁾ Limitations: HSMs are only as good as the data they are based on Marine habitats often have very little data on them This means it’s only a small piece of a larger picture 3. Field Data collection and analysis In addition to the collection and modelling of existing data, we visit field sites to gather baseline monitoring data. Typically, we collect data on: the presence of seagrass, the health of the seagrass, reproductive state, and the local environment – such as sediment type. These datasets are collected through sediment and core samples as well as seagrass blade lengths and abundance counts. Common Difficulties: Land access – some sites can be quite remote, therefore making field surveys difficult. Permissions from both governing bodies and landowners. Ensuring the work doesn’t interfere with other projects on the land. 4. Selection By combining these data, the project lead, along with other experienced ecologists, can assess the suitability of each site for the proposed work package. Project Seagrass is currently working on a numerical system for grading the suitability of sites, to make site selection decisions more transparent. Once the most suitable sites are selected, Project Seagrass can begin to formally seek permissions from governing bodies and landowners. 5. Future Developments Site selection, just like seagrass science, is continuously evolving as new methods, theories and techniques are developed and tested. This means that the models used are constantly changing to produce more accurate and reliable results. Current Site Selection Research: LUSI scores allow the impacts of land on marine environments to be quantified. ⁽³⁾ Use of multiple models such as MaxEnt, cross validation, and threshold probability for model validation has been shown to produce more effective outputs. ⁽²⁾ A Habitat suitability model used for work in Burnt Island, Scotland References Thurstan, R.H., McClenachan, L., Crowder, L.B., Drew, J.A., Kittinger, J.N., Levin, P.S., Roberts, C.M. and Pandolfi, J.M. (2015). Filling historical data gaps to foster solutions in marine conservation. Ocean & Coastal Management, 115, pp.31–40. doi:https://doi.org/10.1016/j.ocecoaman.2015.04.019 Bertelli, C.M., Stokes, H.J., Bull, J.C. and K.F. Unsworth, R. (2022). The use of habitat suitability modelling for seagrass: A review. Frontiers in Marine Science, 9. doi:https://doi.org/10.3389/fmars.2022.997831. Flo, E., Garcés, E. and Camp, J. (2019). Land Uses Simplified Index (LUSI): Determining Land Pressures and Their Link With Coastal Eutrophication. Frontiers in Marine Science, 6. doi:https://doi.org/10.3389/fmars.2019.00018..

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Drone controller being used next to kelp bed

Accelerate Seagrass Drone Survey

Accelerate Seagrass is a collaborative program being delivered by Climate Impact Partners, Deloitte, Project Seagrass, and the National Oceanography Centre which aims to support groundbreaking research into seagrass carbon sequestration and unlock long-term finance to save and reinstate vital seagrass meadows.   Part of this programme of work includes mapping to record the presence and extent of Scotland’s seagrass meadows (vital data to inform the protection and conservation of seagrass meadows and the benefits they provide). In autumn 2025, members of our Scotland team were out in the field carrying out drone surveys in Drum Sands.  In this blog post, our Project Seagrass interns, Ewan Garvey and Jasper Brown discuss the work undertaken: 1.Preparing to Monitor Prior to the commencement of drone work, site assessments were conducted. These checked for air restrictions, site accessibility, and permissions required to access land. Drum Sands (see below map), is a site we have recently mapped and is located within a private estate, requiring permission for access to get to and work on site. This site is located just outside of Edinburgh airport’s no fly zone, a restricted air space which must be kept clear of, at all times. 2. On Site After arriving at the site, we had to transport the kit and get it set up for flying, This included: a Differential Global Positioning System (DGPS), Ground Control Points (GCP’s) and the drone itself. The DGPS is a device which communicates with satellites and allows for extremely accurate spatial referencing of points, down to 3cm variance. The benefits of this system are to allow you to return to the exact location for continuous monitoring. GCP’s were positioned along the sample area. These are large checkered squares which are easily identifiable from the air. The exact locations are taken using the DGPS, to allow for the drone images to be synced to monitoring data. The drone was set up following our pre-flight checklist, ensuring the batteries, cameras, and propellors, were all in working condition. 3. Flying Once the drone had been launched and was in the air, the operator or another team member had to maintain line of sight with the drone at all times. This was to ensure the safety of others and the drone. At Burntisland, another of our sites, this was extremely important, as there is a railway line which runs adjacent to the seagrass meadow. We were given explicit instructions from Network Rail not to fly above the railway line, to avoid any disruptions to their services. Using a pre-programmed flight plan (below) the drone was set on course, taking images with a 75% overlap between images.The flight height was fixed at 60m. This was chosen to provide adequate clearance from the tops of trees and to increase the field of view. Once the flight plan was complete, we checked the images to ensure that the entire area we needed had been surveyed. 4. Challenges One of the biggest hurdles we faced during this drone work was weather; for good quality drone work to take place there must be clear, dry skies with low wind speeds. This was particularly inconvenient for us, as during our planned drone flights at Drum Sands, there were strong winds and rain, which meant that we were unable to fly the drone. Requesting for an extension of site access posed quite a challenge to do last minute but we managed to gain access to complete the work. While the drone was in flight the team had to keep vigilant for potential hazards such asflying birds and members of the public. We did this by having team members stationed along the sample locations. Each team member was provided with a radio to relay important information back to the pilot. This also allowed us to interact with any interested members of the public whist keeping the drone in sight at all times. 5. Wrap up and final product Once all the drone work had been completed, the images captured by the drone were exported and processed using specialised software, to remove the overlap between photos and to merge the separate images into one large map of the whole area. Using other data points gathered from the area we can overlap these and the image to create an easily understood map. We used this method to create the map (see below) which shows Zostera noltii transplant and donor DGPS points, overlayed onto the drone footage we took of Drum Sands.

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